BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB021D05SP1|AL427754
(576 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig183 1126 0.0
>3x_Contig183
Length = 1007
Score = 1126 bits (566), Expect = 0.0
Identities = 572/576 (99%)
Strand = Plus / Minus
Query: 1 gatytactagaaagctttcgttggtcactccaaatattcagggtttatagctgtgttcat 60
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897 gatctactagaaagctttcgttggtcactccaaatattcagggtttatagctgtgttcat 838
Query: 61 ttgctggtttctacggcgagaataatctgaatcataactaaaatcaaaaaaaaagatgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837 ttgctggtttctacggcgagaataatctgaatcataactaaaatcaaaaaaaaagatgca 778
Query: 121 catcaattctgtggttaggaactataggttcctcatcggggccttaactgctttgatgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 777 catcaattctgtggttaggaactataggttcctcatcggggccttaactgctttgatgtt 718
Query: 181 gcttcttttgctaaggtcgtcagcatctccacaagttggttcattggcgaactccaataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gcttcttttgctaaggtcgtcagcatctccacaagttggttcattggcgaactccaataa 658
Query: 241 agtcgacacaccagatgggctaaaagttcctggtgcttcttcaccaatcagtcaaaatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 agtcgacacaccagatgggctaaaagttcctggtgcttcttcaccaatcagtcaaaatat 598
Query: 301 caatgaggattcacaaaagcaaacagccaaagaccacacatcccagaatttggaatctgg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 caatgaggattcacaaaagcaaacagccaaagaccacacatcccagaatttggaatctgg 538
Query: 361 ttccaattccctttccaaatctcagtgtactgagggtcataagttcgtggttatgattga 420
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 537 ttccaattccctttccaaatctcagtgtactgagggtcataagtacgtggttatgattga 478
Query: 421 tgccggttctactggcagtcgtgtacatgtgtatgaatttkacgtttgtacccaaccacc 480
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 477 tgccggttctactggcagtcgtgtacatgtgtatgaatttgacgtttgtacccaaccacc 418
Query: 481 aactttgattaatgaaactttcgagatgttgaagcctggtctatctagtttcgatatcga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aactttgattaatgaaactttcgagatgttgaagcctggtctatctagtttcgatatcga 358
Query: 541 tgctgtgggagccgctaagtccttkgatcctttatt 576
|||||||||||||||||||||||| |||||||||||
Sbjct: 357 tgctgtgggagccgctaagtccttggatcctttatt 322
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4536
Number of Sequences: 1807
Number of extensions: 4536
Number of successful extensions: 110
Number of sequences better than 1.0e-20: 1
length of query: 576
length of database: 10,358,551
effective HSP length: 16
effective length of query: 560
effective length of database: 10,329,639
effective search space: 5784597840
effective search space used: 5784597840
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.4 bits)
S2: 50 (100.0 bits)